For analyzing “Next Generation”
Sequencing data, generated by platforms like the Genome
Sequencer FLX System from Roche Applied Science (454 Life
Sciences) and short read systems such as the Illumina®
Genome Analyzer (Solexa sequencing technology). Designed
with speed and simplicity of use in mind, NextGENe is capable
of completing much of the analysis on a standard PC, and
soon the analysis will be fully compatible with Linux platform.
By statistically polishing the large sets of data into manageable
fragments, NextGENe can quickly generate accurate results.
NextGENe can be used to identify Single Nucleotide Polymorphisms
(SNPs) and small Insertions and Deletions (Indels) for large
scale resequencing projects and transcriptome analyses.
De novo assembly of both long and short
sequences will be available shortly, as well as analysis
of data from the Applied Biosystem SOLiD™ System.
The software is designed to handle the
unique hurdles presented by each platform, such as the homopolymers
for pyrosequencing and short reads generated by both the
bridge amplification sequencing by synthesis method and
the sequencing by ligation method, while utilizing the system’s
• Compatible with all Next Generation Sequencing systems
• Performs Assembly, SNP/Indel detection, Transcriptome
• “Low-end” Hardware Requirements
• Easy & Intuitive User Interface
• Exclusive SoftGenetics technical support